From 390cce0166be0f940e949907ce3ed6daa99917e3 2017-06-27 14:46:30 From: leroux Date: 2017-06-27 14:46:30 Subject: [PATCH] Merge pull request #159 from SCIQLOP-Initialisation develop Develop --- diff --git a/COPYING b/COPYING new file mode 100644 index 0000000..94a9ed0 --- /dev/null +++ b/COPYING @@ -0,0 +1,674 @@ + GNU GENERAL PUBLIC LICENSE + Version 3, 29 June 2007 + + Copyright (C) 2007 Free Software Foundation, Inc. + Everyone is permitted to copy and distribute verbatim copies + of this license document, but changing it is not allowed. + + Preamble + + The GNU General Public License is a free, copyleft license for +software and other kinds of works. + + The licenses for most software and other practical works are designed +to take away your freedom to share and change the works. By contrast, +the GNU General Public License is intended to guarantee your freedom to +share and change all versions of a program--to make sure it remains free +software for all its users. We, the Free Software Foundation, use the +GNU General Public License for most of our software; it applies also to +any other work released this way by its authors. You can apply it to +your programs, too. + + When we speak of free software, we are referring to freedom, not +price. Our General Public Licenses are designed to make sure that you +have the freedom to distribute copies of free software (and charge for +them if you wish), that you receive source code or can get it if you +want it, that you can change the software or use pieces of it in new +free programs, and that you know you can do these things. + + To protect your rights, we need to prevent others from denying you +these rights or asking you to surrender the rights. Therefore, you have +certain responsibilities if you distribute copies of the software, or if +you modify it: responsibilities to respect the freedom of others. + + For example, if you distribute copies of such a program, whether +gratis or for a fee, you must pass on to the recipients the same +freedoms that you received. You must make sure that they, too, receive +or can get the source code. And you must show them these terms so they +know their rights. + + Developers that use the GNU GPL protect your rights with two steps: +(1) assert copyright on the software, and (2) offer you this License +giving you legal permission to copy, distribute and/or modify it. + + For the developers' and authors' protection, the GPL clearly explains +that there is no warranty for this free software. For both users' and +authors' sake, the GPL requires that modified versions be marked as +changed, so that their problems will not be attributed erroneously to +authors of previous versions. + + Some devices are designed to deny users access to install or run +modified versions of the software inside them, although the manufacturer +can do so. This is fundamentally incompatible with the aim of +protecting users' freedom to change the software. The systematic +pattern of such abuse occurs in the area of products for individuals to +use, which is precisely where it is most unacceptable. Therefore, we +have designed this version of the GPL to prohibit the practice for those +products. If such problems arise substantially in other domains, we +stand ready to extend this provision to those domains in future versions +of the GPL, as needed to protect the freedom of users. + + Finally, every program is threatened constantly by software patents. +States should not allow patents to restrict development and use of +software on general-purpose computers, but in those that do, we wish to +avoid the special danger that patents applied to a free program could +make it effectively proprietary. To prevent this, the GPL assures that +patents cannot be used to render the program non-free. + + The precise terms and conditions for copying, distribution and +modification follow. + + TERMS AND CONDITIONS + + 0. Definitions. + + "This License" refers to version 3 of the GNU General Public License. + + "Copyright" also means copyright-like laws that apply to other kinds of +works, such as semiconductor masks. + + "The Program" refers to any copyrightable work licensed under this +License. Each licensee is addressed as "you". "Licensees" and +"recipients" may be individuals or organizations. + + To "modify" a work means to copy from or adapt all or part of the work +in a fashion requiring copyright permission, other than the making of an +exact copy. The resulting work is called a "modified version" of the +earlier work or a work "based on" the earlier work. + + A "covered work" means either the unmodified Program or a work based +on the Program. + + To "propagate" a work means to do anything with it that, without +permission, would make you directly or secondarily liable for +infringement under applicable copyright law, except executing it on a +computer or modifying a private copy. Propagation includes copying, +distribution (with or without modification), making available to the +public, and in some countries other activities as well. + + To "convey" a work means any kind of propagation that enables other +parties to make or receive copies. Mere interaction with a user through +a computer network, with no transfer of a copy, is not conveying. + + An interactive user interface displays "Appropriate Legal Notices" +to the extent that it includes a convenient and prominently visible +feature that (1) displays an appropriate copyright notice, and (2) +tells the user that there is no warranty for the work (except to the +extent that warranties are provided), that licensees may convey the +work under this License, and how to view a copy of this License. If +the interface presents a list of user commands or options, such as a +menu, a prominent item in the list meets this criterion. + + 1. Source Code. + + The "source code" for a work means the preferred form of the work +for making modifications to it. "Object code" means any non-source +form of a work. + + A "Standard Interface" means an interface that either is an official +standard defined by a recognized standards body, or, in the case of +interfaces specified for a particular programming language, one that +is widely used among developers working in that language. + + The "System Libraries" of an executable work include anything, other +than the work as a whole, that (a) is included in the normal form of +packaging a Major Component, but which is not part of that Major +Component, and (b) serves only to enable use of the work with that +Major Component, or to implement a Standard Interface for which an +implementation is available to the public in source code form. A +"Major Component", in this context, means a major essential component +(kernel, window system, and so on) of the specific operating system +(if any) on which the executable work runs, or a compiler used to +produce the work, or an object code interpreter used to run it. + + The "Corresponding Source" for a work in object code form means all +the source code needed to generate, install, and (for an executable +work) run the object code and to modify the work, including scripts to +control those activities. However, it does not include the work's +System Libraries, or general-purpose tools or generally available free +programs which are used unmodified in performing those activities but +which are not part of the work. For example, Corresponding Source +includes interface definition files associated with source files for +the work, and the source code for shared libraries and dynamically +linked subprograms that the work is specifically designed to require, +such as by intimate data communication or control flow between those +subprograms and other parts of the work. + + The Corresponding Source need not include anything that users +can regenerate automatically from other parts of the Corresponding +Source. + + The Corresponding Source for a work in source code form is that +same work. + + 2. Basic Permissions. + + All rights granted under this License are granted for the term of +copyright on the Program, and are irrevocable provided the stated +conditions are met. This License explicitly affirms your unlimited +permission to run the unmodified Program. The output from running a +covered work is covered by this License only if the output, given its +content, constitutes a covered work. This License acknowledges your +rights of fair use or other equivalent, as provided by copyright law. + + You may make, run and propagate covered works that you do not +convey, without conditions so long as your license otherwise remains +in force. You may convey covered works to others for the sole purpose +of having them make modifications exclusively for you, or provide you +with facilities for running those works, provided that you comply with +the terms of this License in conveying all material for which you do +not control copyright. Those thus making or running the covered works +for you must do so exclusively on your behalf, under your direction +and control, on terms that prohibit them from making any copies of +your copyrighted material outside their relationship with you. + + Conveying under any other circumstances is permitted solely under +the conditions stated below. Sublicensing is not allowed; section 10 +makes it unnecessary. + + 3. Protecting Users' Legal Rights From Anti-Circumvention Law. + + No covered work shall be deemed part of an effective technological +measure under any applicable law fulfilling obligations under article +11 of the WIPO copyright treaty adopted on 20 December 1996, or +similar laws prohibiting or restricting circumvention of such +measures. + + When you convey a covered work, you waive any legal power to forbid +circumvention of technological measures to the extent such circumvention +is effected by exercising rights under this License with respect to +the covered work, and you disclaim any intention to limit operation or +modification of the work as a means of enforcing, against the work's +users, your or third parties' legal rights to forbid circumvention of +technological measures. + + 4. Conveying Verbatim Copies. + + You may convey verbatim copies of the Program's source code as you +receive it, in any medium, provided that you conspicuously and +appropriately publish on each copy an appropriate copyright notice; +keep intact all notices stating that this License and any +non-permissive terms added in accord with section 7 apply to the code; +keep intact all notices of the absence of any warranty; and give all +recipients a copy of this License along with the Program. + + You may charge any price or no price for each copy that you convey, +and you may offer support or warranty protection for a fee. + + 5. Conveying Modified Source Versions. + + You may convey a work based on the Program, or the modifications to +produce it from the Program, in the form of source code under the +terms of section 4, provided that you also meet all of these conditions: + + a) The work must carry prominent notices stating that you modified + it, and giving a relevant date. + + b) The work must carry prominent notices stating that it is + released under this License and any conditions added under section + 7. This requirement modifies the requirement in section 4 to + "keep intact all notices". + + c) You must license the entire work, as a whole, under this + License to anyone who comes into possession of a copy. This + License will therefore apply, along with any applicable section 7 + additional terms, to the whole of the work, and all its parts, + regardless of how they are packaged. This License gives no + permission to license the work in any other way, but it does not + invalidate such permission if you have separately received it. + + d) If the work has interactive user interfaces, each must display + Appropriate Legal Notices; however, if the Program has interactive + interfaces that do not display Appropriate Legal Notices, your + work need not make them do so. + + A compilation of a covered work with other separate and independent +works, which are not by their nature extensions of the covered work, +and which are not combined with it such as to form a larger program, +in or on a volume of a storage or distribution medium, is called an +"aggregate" if the compilation and its resulting copyright are not +used to limit the access or legal rights of the compilation's users +beyond what the individual works permit. Inclusion of a covered work +in an aggregate does not cause this License to apply to the other +parts of the aggregate. + + 6. Conveying Non-Source Forms. + + You may convey a covered work in object code form under the terms +of sections 4 and 5, provided that you also convey the +machine-readable Corresponding Source under the terms of this License, +in one of these ways: + + a) Convey the object code in, or embodied in, a physical product + (including a physical distribution medium), accompanied by the + Corresponding Source fixed on a durable physical medium + customarily used for software interchange. + + b) Convey the object code in, or embodied in, a physical product + (including a physical distribution medium), accompanied by a + written offer, valid for at least three years and valid for as + long as you offer spare parts or customer support for that product + model, to give anyone who possesses the object code either (1) a + copy of the Corresponding Source for all the software in the + product that is covered by this License, on a durable physical + medium customarily used for software interchange, for a price no + more than your reasonable cost of physically performing this + conveying of source, or (2) access to copy the + Corresponding Source from a network server at no charge. + + c) Convey individual copies of the object code with a copy of the + written offer to provide the Corresponding Source. This + alternative is allowed only occasionally and noncommercially, and + only if you received the object code with such an offer, in accord + with subsection 6b. + + d) Convey the object code by offering access from a designated + place (gratis or for a charge), and offer equivalent access to the + Corresponding Source in the same way through the same place at no + further charge. You need not require recipients to copy the + Corresponding Source along with the object code. If the place to + copy the object code is a network server, the Corresponding Source + may be on a different server (operated by you or a third party) + that supports equivalent copying facilities, provided you maintain + clear directions next to the object code saying where to find the + Corresponding Source. Regardless of what server hosts the + Corresponding Source, you remain obligated to ensure that it is + available for as long as needed to satisfy these requirements. + + e) Convey the object code using peer-to-peer transmission, provided + you inform other peers where the object code and Corresponding + Source of the work are being offered to the general public at no + charge under subsection 6d. + + A separable portion of the object code, whose source code is excluded +from the Corresponding Source as a System Library, need not be +included in conveying the object code work. + + A "User Product" is either (1) a "consumer product", which means any +tangible personal property which is normally used for personal, family, +or household purposes, or (2) anything designed or sold for incorporation +into a dwelling. In determining whether a product is a consumer product, +doubtful cases shall be resolved in favor of coverage. For a particular +product received by a particular user, "normally used" refers to a +typical or common use of that class of product, regardless of the status +of the particular user or of the way in which the particular user +actually uses, or expects or is expected to use, the product. A product +is a consumer product regardless of whether the product has substantial +commercial, industrial or non-consumer uses, unless such uses represent +the only significant mode of use of the product. + + "Installation Information" for a User Product means any methods, +procedures, authorization keys, or other information required to install +and execute modified versions of a covered work in that User Product from +a modified version of its Corresponding Source. The information must +suffice to ensure that the continued functioning of the modified object +code is in no case prevented or interfered with solely because +modification has been made. + + If you convey an object code work under this section in, or with, or +specifically for use in, a User Product, and the conveying occurs as +part of a transaction in which the right of possession and use of the +User Product is transferred to the recipient in perpetuity or for a +fixed term (regardless of how the transaction is characterized), the +Corresponding Source conveyed under this section must be accompanied +by the Installation Information. But this requirement does not apply +if neither you nor any third party retains the ability to install +modified object code on the User Product (for example, the work has +been installed in ROM). + + The requirement to provide Installation Information does not include a +requirement to continue to provide support service, warranty, or updates +for a work that has been modified or installed by the recipient, or for +the User Product in which it has been modified or installed. Access to a +network may be denied when the modification itself materially and +adversely affects the operation of the network or violates the rules and +protocols for communication across the network. + + Corresponding Source conveyed, and Installation Information provided, +in accord with this section must be in a format that is publicly +documented (and with an implementation available to the public in +source code form), and must require no special password or key for +unpacking, reading or copying. + + 7. Additional Terms. + + "Additional permissions" are terms that supplement the terms of this +License by making exceptions from one or more of its conditions. +Additional permissions that are applicable to the entire Program shall +be treated as though they were included in this License, to the extent +that they are valid under applicable law. If additional permissions +apply only to part of the Program, that part may be used separately +under those permissions, but the entire Program remains governed by +this License without regard to the additional permissions. + + When you convey a copy of a covered work, you may at your option +remove any additional permissions from that copy, or from any part of +it. (Additional permissions may be written to require their own +removal in certain cases when you modify the work.) You may place +additional permissions on material, added by you to a covered work, +for which you have or can give appropriate copyright permission. + + Notwithstanding any other provision of this License, for material you +add to a covered work, you may (if authorized by the copyright holders of +that material) supplement the terms of this License with terms: + + a) Disclaiming warranty or limiting liability differently from the + terms of sections 15 and 16 of this License; or + + b) Requiring preservation of specified reasonable legal notices or + author attributions in that material or in the Appropriate Legal + Notices displayed by works containing it; or + + c) Prohibiting misrepresentation of the origin of that material, or + requiring that modified versions of such material be marked in + reasonable ways as different from the original version; or + + d) Limiting the use for publicity purposes of names of licensors or + authors of the material; or + + e) Declining to grant rights under trademark law for use of some + trade names, trademarks, or service marks; or + + f) Requiring indemnification of licensors and authors of that + material by anyone who conveys the material (or modified versions of + it) with contractual assumptions of liability to the recipient, for + any liability that these contractual assumptions directly impose on + those licensors and authors. + + All other non-permissive additional terms are considered "further +restrictions" within the meaning of section 10. If the Program as you +received it, or any part of it, contains a notice stating that it is +governed by this License along with a term that is a further +restriction, you may remove that term. If a license document contains +a further restriction but permits relicensing or conveying under this +License, you may add to a covered work material governed by the terms +of that license document, provided that the further restriction does +not survive such relicensing or conveying. + + If you add terms to a covered work in accord with this section, you +must place, in the relevant source files, a statement of the +additional terms that apply to those files, or a notice indicating +where to find the applicable terms. + + Additional terms, permissive or non-permissive, may be stated in the +form of a separately written license, or stated as exceptions; +the above requirements apply either way. + + 8. Termination. + + You may not propagate or modify a covered work except as expressly +provided under this License. Any attempt otherwise to propagate or +modify it is void, and will automatically terminate your rights under +this License (including any patent licenses granted under the third +paragraph of section 11). + + However, if you cease all violation of this License, then your +license from a particular copyright holder is reinstated (a) +provisionally, unless and until the copyright holder explicitly and +finally terminates your license, and (b) permanently, if the copyright +holder fails to notify you of the violation by some reasonable means +prior to 60 days after the cessation. + + Moreover, your license from a particular copyright holder is +reinstated permanently if the copyright holder notifies you of the +violation by some reasonable means, this is the first time you have +received notice of violation of this License (for any work) from that +copyright holder, and you cure the violation prior to 30 days after +your receipt of the notice. + + Termination of your rights under this section does not terminate the +licenses of parties who have received copies or rights from you under +this License. If your rights have been terminated and not permanently +reinstated, you do not qualify to receive new licenses for the same +material under section 10. + + 9. Acceptance Not Required for Having Copies. + + You are not required to accept this License in order to receive or +run a copy of the Program. Ancillary propagation of a covered work +occurring solely as a consequence of using peer-to-peer transmission +to receive a copy likewise does not require acceptance. However, +nothing other than this License grants you permission to propagate or +modify any covered work. These actions infringe copyright if you do +not accept this License. Therefore, by modifying or propagating a +covered work, you indicate your acceptance of this License to do so. + + 10. Automatic Licensing of Downstream Recipients. + + Each time you convey a covered work, the recipient automatically +receives a license from the original licensors, to run, modify and +propagate that work, subject to this License. You are not responsible +for enforcing compliance by third parties with this License. + + An "entity transaction" is a transaction transferring control of an +organization, or substantially all assets of one, or subdividing an +organization, or merging organizations. If propagation of a covered +work results from an entity transaction, each party to that +transaction who receives a copy of the work also receives whatever +licenses to the work the party's predecessor in interest had or could +give under the previous paragraph, plus a right to possession of the +Corresponding Source of the work from the predecessor in interest, if +the predecessor has it or can get it with reasonable efforts. + + You may not impose any further restrictions on the exercise of the +rights granted or affirmed under this License. For example, you may +not impose a license fee, royalty, or other charge for exercise of +rights granted under this License, and you may not initiate litigation +(including a cross-claim or counterclaim in a lawsuit) alleging that +any patent claim is infringed by making, using, selling, offering for +sale, or importing the Program or any portion of it. + + 11. Patents. + + A "contributor" is a copyright holder who authorizes use under this +License of the Program or a work on which the Program is based. The +work thus licensed is called the contributor's "contributor version". + + A contributor's "essential patent claims" are all patent claims +owned or controlled by the contributor, whether already acquired or +hereafter acquired, that would be infringed by some manner, permitted +by this License, of making, using, or selling its contributor version, +but do not include claims that would be infringed only as a +consequence of further modification of the contributor version. For +purposes of this definition, "control" includes the right to grant +patent sublicenses in a manner consistent with the requirements of +this License. + + Each contributor grants you a non-exclusive, worldwide, royalty-free +patent license under the contributor's essential patent claims, to +make, use, sell, offer for sale, import and otherwise run, modify and +propagate the contents of its contributor version. + + In the following three paragraphs, a "patent license" is any express +agreement or commitment, however denominated, not to enforce a patent +(such as an express permission to practice a patent or covenant not to +sue for patent infringement). To "grant" such a patent license to a +party means to make such an agreement or commitment not to enforce a +patent against the party. + + If you convey a covered work, knowingly relying on a patent license, +and the Corresponding Source of the work is not available for anyone +to copy, free of charge and under the terms of this License, through a +publicly available network server or other readily accessible means, +then you must either (1) cause the Corresponding Source to be so +available, or (2) arrange to deprive yourself of the benefit of the +patent license for this particular work, or (3) arrange, in a manner +consistent with the requirements of this License, to extend the patent +license to downstream recipients. "Knowingly relying" means you have +actual knowledge that, but for the patent license, your conveying the +covered work in a country, or your recipient's use of the covered work +in a country, would infringe one or more identifiable patents in that +country that you have reason to believe are valid. + + If, pursuant to or in connection with a single transaction or +arrangement, you convey, or propagate by procuring conveyance of, a +covered work, and grant a patent license to some of the parties +receiving the covered work authorizing them to use, propagate, modify +or convey a specific copy of the covered work, then the patent license +you grant is automatically extended to all recipients of the covered +work and works based on it. + + A patent license is "discriminatory" if it does not include within +the scope of its coverage, prohibits the exercise of, or is +conditioned on the non-exercise of one or more of the rights that are +specifically granted under this License. You may not convey a covered +work if you are a party to an arrangement with a third party that is +in the business of distributing software, under which you make payment +to the third party based on the extent of your activity of conveying +the work, and under which the third party grants, to any of the +parties who would receive the covered work from you, a discriminatory +patent license (a) in connection with copies of the covered work +conveyed by you (or copies made from those copies), or (b) primarily +for and in connection with specific products or compilations that +contain the covered work, unless you entered into that arrangement, +or that patent license was granted, prior to 28 March 2007. + + Nothing in this License shall be construed as excluding or limiting +any implied license or other defenses to infringement that may +otherwise be available to you under applicable patent law. + + 12. No Surrender of Others' Freedom. + + If conditions are imposed on you (whether by court order, agreement or +otherwise) that contradict the conditions of this License, they do not +excuse you from the conditions of this License. If you cannot convey a +covered work so as to satisfy simultaneously your obligations under this +License and any other pertinent obligations, then as a consequence you may +not convey it at all. For example, if you agree to terms that obligate you +to collect a royalty for further conveying from those to whom you convey +the Program, the only way you could satisfy both those terms and this +License would be to refrain entirely from conveying the Program. + + 13. Use with the GNU Affero General Public License. + + Notwithstanding any other provision of this License, you have +permission to link or combine any covered work with a work licensed +under version 3 of the GNU Affero General Public License into a single +combined work, and to convey the resulting work. The terms of this +License will continue to apply to the part which is the covered work, +but the special requirements of the GNU Affero General Public License, +section 13, concerning interaction through a network will apply to the +combination as such. + + 14. Revised Versions of this License. + + The Free Software Foundation may publish revised and/or new versions of +the GNU General Public License from time to time. Such new versions will +be similar in spirit to the present version, but may differ in detail to +address new problems or concerns. + + Each version is given a distinguishing version number. If the +Program specifies that a certain numbered version of the GNU General +Public License "or any later version" applies to it, you have the +option of following the terms and conditions either of that numbered +version or of any later version published by the Free Software +Foundation. If the Program does not specify a version number of the +GNU General Public License, you may choose any version ever published +by the Free Software Foundation. + + If the Program specifies that a proxy can decide which future +versions of the GNU General Public License can be used, that proxy's +public statement of acceptance of a version permanently authorizes you +to choose that version for the Program. + + Later license versions may give you additional or different +permissions. However, no additional obligations are imposed on any +author or copyright holder as a result of your choosing to follow a +later version. + + 15. Disclaimer of Warranty. + + THERE IS NO WARRANTY FOR THE PROGRAM, TO THE EXTENT PERMITTED BY +APPLICABLE LAW. EXCEPT WHEN OTHERWISE STATED IN WRITING THE COPYRIGHT +HOLDERS AND/OR OTHER PARTIES PROVIDE THE PROGRAM "AS IS" WITHOUT WARRANTY +OF ANY KIND, EITHER EXPRESSED OR IMPLIED, INCLUDING, BUT NOT LIMITED TO, +THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR +PURPOSE. THE ENTIRE RISK AS TO THE QUALITY AND PERFORMANCE OF THE PROGRAM +IS WITH YOU. SHOULD THE PROGRAM PROVE DEFECTIVE, YOU ASSUME THE COST OF +ALL NECESSARY SERVICING, REPAIR OR CORRECTION. + + 16. Limitation of Liability. + + IN NO EVENT UNLESS REQUIRED BY APPLICABLE LAW OR AGREED TO IN WRITING +WILL ANY COPYRIGHT HOLDER, OR ANY OTHER PARTY WHO MODIFIES AND/OR CONVEYS +THE PROGRAM AS PERMITTED ABOVE, BE LIABLE TO YOU FOR DAMAGES, INCLUDING ANY +GENERAL, SPECIAL, INCIDENTAL OR CONSEQUENTIAL DAMAGES ARISING OUT OF THE +USE OR INABILITY TO USE THE PROGRAM (INCLUDING BUT NOT LIMITED TO LOSS OF +DATA OR DATA BEING RENDERED INACCURATE OR LOSSES SUSTAINED BY YOU OR THIRD +PARTIES OR A FAILURE OF THE PROGRAM TO OPERATE WITH ANY OTHER PROGRAMS), +EVEN IF SUCH HOLDER OR OTHER PARTY HAS BEEN ADVISED OF THE POSSIBILITY OF +SUCH DAMAGES. + + 17. Interpretation of Sections 15 and 16. + + If the disclaimer of warranty and limitation of liability provided +above cannot be given local legal effect according to their terms, +reviewing courts shall apply local law that most closely approximates +an absolute waiver of all civil liability in connection with the +Program, unless a warranty or assumption of liability accompanies a +copy of the Program in return for a fee. + + END OF TERMS AND CONDITIONS + + How to Apply These Terms to Your New Programs + + If you develop a new program, and you want it to be of the greatest +possible use to the public, the best way to achieve this is to make it +free software which everyone can redistribute and change under these terms. + + To do so, attach the following notices to the program. It is safest +to attach them to the start of each source file to most effectively +state the exclusion of warranty; and each file should have at least +the "copyright" line and a pointer to where the full notice is found. + + + Copyright (C) + + This program is free software: you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation, either version 3 of the License, or + (at your option) any later version. + + This program is distributed in the hope that it will be useful, + but WITHOUT ANY WARRANTY; without even the implied warranty of + MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + GNU General Public License for more details. + + You should have received a copy of the GNU General Public License + along with this program. If not, see . + +Also add information on how to contact you by electronic and paper mail. + + If the program does terminal interaction, make it output a short +notice like this when it starts in an interactive mode: + + Copyright (C) + This program comes with ABSOLUTELY NO WARRANTY; for details type `show w'. + This is free software, and you are welcome to redistribute it + under certain conditions; type `show c' for details. + +The hypothetical commands `show w' and `show c' should show the appropriate +parts of the General Public License. Of course, your program's commands +might be different; for a GUI interface, you would use an "about box". + + You should also get your employer (if you work as a programmer) or school, +if any, to sign a "copyright disclaimer" for the program, if necessary. +For more information on this, and how to apply and follow the GNU GPL, see +. + + The GNU General Public License does not permit incorporating your program +into proprietary programs. If your program is a subroutine library, you +may consider it more useful to permit linking proprietary applications with +the library. If this is what you want to do, use the GNU Lesser General +Public License instead of this License. But first, please read +. diff --git a/LICENSE b/LICENSE deleted file mode 100644 index 1333ed7..0000000 --- a/LICENSE +++ /dev/null @@ -1 +0,0 @@ -TODO diff --git a/README.md b/README.md index 30404ce..f0da02b 100644 --- a/README.md +++ b/README.md @@ -1 +1,31 @@ -TODO \ No newline at end of file +![](gui/resources/icones/sciqlop2PNG_1024.png){:.some-css-class style="width: 20%"} + + +# Overview + +** SciQLOP ** (**SCI**entific **Q**t application for **L**earning from **O**bservations of **P**lasmas) aims to be an ergonomic +and powerful tool enabling visualization and analysis of in-situ space plasma data. This goal rises some +challenges either technical and in the conception and the design. +The time resolution allowed by nowadays measurements imply the ability to plot millions of points just for +one sensor with no compromise on interactivity. Plots may stay responsive even with millions of points. +Being able to scroll, zoom, move and export the plots with the mouse are the minimal interactions expected by the user. +SciQLOP may also abstract the manipulation of physic data while providing contextual features such as +coordinate transform, physical quantity extraction from data. +That said increasing graphical features usually lead to slower software and more complex GUI. Keeping +SciQLOP lightweight and intuitive is one of the priorities to make it usable and competitive. + + +## How to build + +``` +git clone https://hephaistos.lpp.polytechnique.fr/rhodecode/HG_REPOSITORIES/LPP/SciQLOP_Repos/SciQLop +cd SciQLop +mkdir build && cd build +cmake ../ +make + +``` + +## How to contribute + +Contact sciqlop@lpp.polytechnique.fr diff --git a/core/include/Data/ArrayData.h b/core/include/Data/ArrayData.h index b08f0c2..5be205f 100644 --- a/core/include/Data/ArrayData.h +++ b/core/include/Data/ArrayData.h @@ -49,6 +49,32 @@ public: return m_Data.at(0); } + /** + * @return the data as a vector + * @remarks this method is only available for a unidimensional ArrayData + */ + template > + const QVector &data(double tStart, double tEnd) const noexcept + { + return m_Data.at(tStart); + } + + // TODO Comment + template > + void merge(ArrayData<1> *arrayData) + { + if (!m_Data.empty()) { + m_Data[0] += arrayData->data(); + } + } + + template > + int size() + { + return m_Data[0].size(); + } + + private: QVector > m_Data; }; diff --git a/core/include/Data/DataSeries.h b/core/include/Data/DataSeries.h index f9de7dc..6232a63 100644 --- a/core/include/Data/DataSeries.h +++ b/core/include/Data/DataSeries.h @@ -29,6 +29,15 @@ public: /// @sa IDataSeries::valuesUnit() Unit valuesUnit() const override { return m_ValuesUnit; } + /// @sa IDataSeries::merge() + void merge(IDataSeries *dataSeries) override + { + if (auto dimDataSeries = dynamic_cast *>(dataSeries)) { + m_XAxisData->merge(dimDataSeries->xAxisData().get()); + m_ValuesData->merge(dimDataSeries->valuesData().get()); + } + } + protected: /// Protected ctor (DataSeries is abstract) explicit DataSeries(std::shared_ptr > xAxisData, const Unit &xAxisUnit, diff --git a/core/include/Data/IDataProvider.h b/core/include/Data/IDataProvider.h index 628d123..5d025cf 100644 --- a/core/include/Data/IDataProvider.h +++ b/core/include/Data/IDataProvider.h @@ -5,6 +5,8 @@ #include +#include + class DataProviderParameters; class IDataSeries; @@ -16,14 +18,21 @@ class IDataSeries; * * @sa IDataSeries */ -class IDataProvider { +class IDataProvider : public QObject { + + Q_OBJECT public: virtual ~IDataProvider() noexcept = default; virtual std::unique_ptr retrieveData(const DataProviderParameters ¶meters) const = 0; -}; + + virtual void requestDataLoading(const QVector &dateTimeList) = 0; + +signals: + void dataProvided(std::shared_ptr dateSerie, SqpDateTime dateTime); +}; // Required for using shared_ptr in signals/slots Q_DECLARE_METATYPE(std::shared_ptr) diff --git a/core/include/Data/IDataSeries.h b/core/include/Data/IDataSeries.h index 26a80a1..bbea31f 100644 --- a/core/include/Data/IDataSeries.h +++ b/core/include/Data/IDataSeries.h @@ -1,10 +1,12 @@ #ifndef SCIQLOP_IDATASERIES_H #define SCIQLOP_IDATASERIES_H -#include #include +#include +#include + template class ArrayData; @@ -42,6 +44,11 @@ public: virtual Unit xAxisUnit() const = 0; virtual Unit valuesUnit() const = 0; + + virtual void merge(IDataSeries *dataSeries) = 0; }; +// Required for using shared_ptr in signals/slots +Q_DECLARE_METATYPE(std::shared_ptr) + #endif // SCIQLOP_IDATASERIES_H diff --git a/core/include/Data/SqpDateTime.h b/core/include/Data/SqpDateTime.h index a6d1aa4..7ecec9f 100644 --- a/core/include/Data/SqpDateTime.h +++ b/core/include/Data/SqpDateTime.h @@ -1,6 +1,7 @@ #ifndef SCIQLOP_SQPDATETIME_H #define SCIQLOP_SQPDATETIME_H +#include /** * @brief The SqpDateTime struct holds the information of time parameters */ @@ -9,6 +10,14 @@ struct SqpDateTime { double m_TStart; /// End time double m_TEnd; + + bool contains(const SqpDateTime &dateTime) + { + return (m_TStart <= dateTime.m_TStart && m_TEnd >= dateTime.m_TEnd); + } }; +// Required for using shared_ptr in signals/slots +Q_DECLARE_METATYPE(SqpDateTime) + #endif // SCIQLOP_SQPDATETIME_H diff --git a/core/include/Variable/Variable.h b/core/include/Variable/Variable.h index 228202c..c233bde 100644 --- a/core/include/Variable/Variable.h +++ b/core/include/Variable/Variable.h @@ -1,29 +1,48 @@ #ifndef SCIQLOP_VARIABLE_H #define SCIQLOP_VARIABLE_H -#include +#include + +#include #include +#include + +Q_DECLARE_LOGGING_CATEGORY(LOG_Variable) + class IDataSeries; class QString; /** * @brief The Variable class represents a variable in SciQlop. */ -class Variable { +class Variable : public QObject { + + Q_OBJECT + public: - explicit Variable(const QString &name, const QString &unit, const QString &mission); + explicit Variable(const QString &name, const QString &unit, const QString &mission, + const SqpDateTime &dateTime); QString name() const noexcept; QString mission() const noexcept; QString unit() const noexcept; - - void addDataSeries(std::unique_ptr dataSeries) noexcept; + SqpDateTime dateTime() const noexcept; /// @return the data of the variable, nullptr if there is no data IDataSeries *dataSeries() const noexcept; + bool contains(SqpDateTime dateTime); + void setDataSeries(std::unique_ptr dataSeries) noexcept; + +public slots: + void onAddDataSeries(std::shared_ptr dataSeries) noexcept; + +signals: + void dataCacheUpdated(); + + private: class VariablePrivate; spimpl::unique_impl_ptr impl; diff --git a/core/include/Variable/VariableCacheController.h b/core/include/Variable/VariableCacheController.h new file mode 100644 index 0000000..edcc65d --- /dev/null +++ b/core/include/Variable/VariableCacheController.h @@ -0,0 +1,33 @@ +#ifndef SCIQLOP_VARIABLECACHECONTROLLER_H +#define SCIQLOP_VARIABLECACHECONTROLLER_H + +#include + +#include + +#include + +class Variable; + +/// This class aims to store in the cash all of the dateTime already requested to the variable. +class VariableCacheController : public QObject { + Q_OBJECT +public: + explicit VariableCacheController(QObject *parent = 0); + + + void addDateTime(std::shared_ptr variable, const SqpDateTime &dateTime); + + /// Return all of the SqpDataTime part of the dateTime whose are not in the cache + QVector provideNotInCacheDateTimeList(std::shared_ptr variable, + const SqpDateTime &dateTime); + + + QVector dateCacheList(std::shared_ptr variable) const noexcept; + +private: + class VariableCacheControllerPrivate; + spimpl::unique_impl_ptr impl; +}; + +#endif // SCIQLOP_VARIABLECACHECONTROLLER_H diff --git a/core/include/Variable/VariableController.h b/core/include/Variable/VariableController.h index 0945b53..603c1e9 100644 --- a/core/include/Variable/VariableController.h +++ b/core/include/Variable/VariableController.h @@ -1,11 +1,14 @@ #ifndef SCIQLOP_VARIABLECONTROLLER_H #define SCIQLOP_VARIABLECONTROLLER_H +#include + #include #include #include + class IDataProvider; class TimeController; class Variable; @@ -26,6 +29,10 @@ public: void setTimeController(TimeController *timeController) noexcept; + + /// Request the data loading of the variable whithin dateTime + void requestDataLoading(std::shared_ptr variable, const SqpDateTime &dateTime); + signals: /// Signal emitted when a variable has been created void variableCreated(std::shared_ptr variable); diff --git a/core/include/Variable/VariableModel.h b/core/include/Variable/VariableModel.h index 140a02a..490f43b 100644 --- a/core/include/Variable/VariableModel.h +++ b/core/include/Variable/VariableModel.h @@ -1,11 +1,14 @@ #ifndef SCIQLOP_VARIABLEMODEL_H #define SCIQLOP_VARIABLEMODEL_H -#include + +#include #include #include +#include + Q_DECLARE_LOGGING_CATEGORY(LOG_VariableModel) class IDataSeries; @@ -21,11 +24,13 @@ public: /** * Creates a new variable in the model * @param name the name of the new variable + * @param dateTime the dateTime of the new variable * @param defaultDataSeries the default data of the new variable * @return the pointer to the new variable */ std::shared_ptr - createVariable(const QString &name, std::unique_ptr defaultDataSeries) noexcept; + createVariable(const QString &name, const SqpDateTime &dateTime, + std::unique_ptr defaultDataSeries) noexcept; // /////////////////////////// // // QAbstractTableModel methods // diff --git a/core/src/Variable/Variable.cpp b/core/src/Variable/Variable.cpp index 544d73d..43864d5 100644 --- a/core/src/Variable/Variable.cpp +++ b/core/src/Variable/Variable.cpp @@ -1,21 +1,32 @@ #include "Variable/Variable.h" #include +#include + +Q_LOGGING_CATEGORY(LOG_Variable, "Variable") struct Variable::VariablePrivate { - explicit VariablePrivate(const QString &name, const QString &unit, const QString &mission) - : m_Name{name}, m_Unit{unit}, m_Mission{mission}, m_DataSeries{nullptr} + explicit VariablePrivate(const QString &name, const QString &unit, const QString &mission, + const SqpDateTime &dateTime) + : m_Name{name}, + m_Unit{unit}, + m_Mission{mission}, + m_DateTime{dateTime}, + m_DataSeries{nullptr} { } QString m_Name; QString m_Unit; QString m_Mission; + + SqpDateTime m_DateTime; // The dateTime available in the view and loaded. not the cache. std::unique_ptr m_DataSeries; }; -Variable::Variable(const QString &name, const QString &unit, const QString &mission) - : impl{spimpl::make_unique_impl(name, unit, mission)} +Variable::Variable(const QString &name, const QString &unit, const QString &mission, + const SqpDateTime &dateTime) + : impl{spimpl::make_unique_impl(name, unit, mission, dateTime)} { } @@ -34,15 +45,45 @@ QString Variable::unit() const noexcept return impl->m_Unit; } -void Variable::addDataSeries(std::unique_ptr dataSeries) noexcept +SqpDateTime Variable::dateTime() const noexcept +{ + return impl->m_DateTime; +} + +void Variable::setDataSeries(std::unique_ptr dataSeries) noexcept { if (!impl->m_DataSeries) { impl->m_DataSeries = std::move(dataSeries); } - /// @todo : else, merge the two data series (if possible) +} + +void Variable::onAddDataSeries(std::shared_ptr dataSeries) noexcept +{ + if (impl->m_DataSeries) { + impl->m_DataSeries->merge(dataSeries.get()); + + emit dataCacheUpdated(); + } } IDataSeries *Variable::dataSeries() const noexcept { return impl->m_DataSeries.get(); } + +bool Variable::contains(SqpDateTime dateTime) +{ + if (!impl->m_DateTime.contains(dateTime)) { + // The current variable dateTime isn't enough to display the dateTime requested. + // We have to update it to the new dateTime requested. + // the correspondant new data to display will be given by the cache if possible and the + // provider if necessary. + qCInfo(LOG_Variable()) << "NEW DATE NEEDED"; + + impl->m_DateTime = dateTime; + + return false; + } + + return true; +} diff --git a/core/src/Variable/VariableCacheController.cpp b/core/src/Variable/VariableCacheController.cpp new file mode 100644 index 0000000..63209ce --- /dev/null +++ b/core/src/Variable/VariableCacheController.cpp @@ -0,0 +1,173 @@ +#include "Variable/VariableCacheController.h" + +#include "Variable/Variable.h" +#include + +struct VariableCacheController::VariableCacheControllerPrivate { + + std::unordered_map, QVector > + m_VariableToSqpDateTimeListMap; + + void addInCacheDataByEnd(const SqpDateTime &dateTime, QVector &dateTimeList, + QVector ¬InCache, int cacheIndex, + double currentTStart); + + void addInCacheDataByStart(const SqpDateTime &dateTime, QVector &dateTimeList, + QVector ¬InCache, int cacheIndex, + double currentTStart); + + + void addDateTimeRecurse(const SqpDateTime &dateTime, QVector &dateTimeList, + int cacheIndex); +}; + + +VariableCacheController::VariableCacheController(QObject *parent) + : QObject(parent), impl{spimpl::make_unique_impl()} +{ +} + +void VariableCacheController::addDateTime(std::shared_ptr variable, + const SqpDateTime &dateTime) +{ + if (variable) { + auto findVariableIte = impl->m_VariableToSqpDateTimeListMap.find(variable); + if (findVariableIte == impl->m_VariableToSqpDateTimeListMap.end()) { + impl->m_VariableToSqpDateTimeListMap[variable].push_back(dateTime); + } + else { + + // addDateTime modify the list of the variable in a way to ensure + // that the list is ordered : l(0) < l(1). We assume also a < b + // (with a & b of type SqpDateTime) means ts(b) > te(a) + + // The algorithm will try the merge of two interval: + // - dateTime will be compare with the first interval of the list: + // A: if it is inferior, it will be inserted and it's finished. + // B: if it is in intersection, it will be merge then the merged one + // will be compared to the next interval. The old one is remove from the list + // C: if it is superior, we do the same with the next interval of the list + + int cacheIndex = 0; + impl->addDateTimeRecurse(dateTime, impl->m_VariableToSqpDateTimeListMap.at(variable), + cacheIndex); + } + } +} + +QVector +VariableCacheController::provideNotInCacheDateTimeList(std::shared_ptr variable, + const SqpDateTime &dateTime) +{ + auto notInCache = QVector{}; + + // This algorithm is recursif. The idea is to localise the start time then the end time in the + // list of date time request associated to the variable + // We assume that the list is ordered in a way that l(0) < l(1). We assume also a < b + // (with a & b of type SqpDateTime) means ts(b) > te(a) + + impl->addInCacheDataByStart(dateTime, impl->m_VariableToSqpDateTimeListMap.at(variable), + notInCache, 0, dateTime.m_TStart); + + return notInCache; +} + +QVector +VariableCacheController::dateCacheList(std::shared_ptr variable) const noexcept +{ + return impl->m_VariableToSqpDateTimeListMap.at(variable); +} + +void VariableCacheController::VariableCacheControllerPrivate::addDateTimeRecurse( + const SqpDateTime &dateTime, QVector &dateTimeList, int cacheIndex) +{ + const auto dateTimeListSize = dateTimeList.count(); + if (cacheIndex >= dateTimeListSize) { + dateTimeList.push_back(dateTime); + // there is no anymore interval to compore, we can just push_back it + return; + } + + auto currentDateTime = dateTimeList[cacheIndex]; + + if (dateTime.m_TEnd < currentDateTime.m_TStart) { + // The compared one is < to current one compared, we can insert it + dateTimeList.insert(cacheIndex, dateTime); + } + + else if (dateTime.m_TStart > currentDateTime.m_TEnd) { + // The compared one is > to current one compared we can comparet if to the next one + addDateTimeRecurse(dateTime, dateTimeList, ++cacheIndex); + } + else { + // Merge cases: we need to merge the two interval, remove the old one from the list then + // rerun the algo from this index with the merged interval + auto mTStart = std::min(dateTime.m_TStart, currentDateTime.m_TStart); + auto mTEnd = std::max(dateTime.m_TEnd, currentDateTime.m_TEnd); + auto mergeDateTime = SqpDateTime{mTStart, mTEnd}; + + dateTimeList.remove(cacheIndex); + addDateTimeRecurse(mergeDateTime, dateTimeList, cacheIndex); + } +} + + +void VariableCacheController::VariableCacheControllerPrivate::addInCacheDataByEnd( + const SqpDateTime &dateTime, QVector &dateTimeList, + QVector ¬InCache, int cacheIndex, double currentTStart) +{ + const auto dateTimeListSize = dateTimeList.count(); + if (cacheIndex >= dateTimeListSize) { + if (currentTStart < dateTime.m_TEnd) { + + // te localised after all other interval: The last interval is [currentTsart, te] + notInCache.push_back(SqpDateTime{currentTStart, dateTime.m_TEnd}); + } + return; + } + + auto currentDateTimeJ = dateTimeList[cacheIndex]; + if (dateTime.m_TEnd <= currentDateTimeJ.m_TStart) { + // te localised between to interval: The last interval is [currentTsart, te] + notInCache.push_back(SqpDateTime{currentTStart, dateTime.m_TEnd}); + } + else { + notInCache.push_back(SqpDateTime{currentTStart, currentDateTimeJ.m_TStart}); + if (dateTime.m_TEnd > currentDateTimeJ.m_TEnd) { + // te not localised before the current interval: we need to look at the next interval + addInCacheDataByEnd(dateTime, dateTimeList, notInCache, ++cacheIndex, + currentDateTimeJ.m_TEnd); + } + } +} + +void VariableCacheController::VariableCacheControllerPrivate::addInCacheDataByStart( + const SqpDateTime &dateTime, QVector &dateTimeList, + QVector ¬InCache, int cacheIndex, double currentTStart) +{ + const auto dateTimeListSize = dateTimeList.count(); + if (cacheIndex >= dateTimeListSize) { + // ts localised after all other interval: The last interval is [ts, te] + notInCache.push_back(SqpDateTime{currentTStart, dateTime.m_TEnd}); + return; + } + + auto currentDateTimeI = dateTimeList[cacheIndex]; + auto cacheIndexJ = cacheIndex; + if (currentTStart < currentDateTimeI.m_TStart) { + + // ts localised between to interval: let's localized te + addInCacheDataByEnd(dateTime, dateTimeList, notInCache, cacheIndexJ, currentTStart); + } + else if (dateTime.m_TStart < currentDateTimeI.m_TEnd) { + // ts not localised before the current interval: we need to look at the next interval + // We can assume now current tstart is the last interval tend, because data between them are + // in the cache + addInCacheDataByStart(dateTime, dateTimeList, notInCache, ++cacheIndex, + currentDateTimeI.m_TEnd); + } + else { + // ts not localised before the current interval: we need to look at the next interval + addInCacheDataByStart(dateTime, dateTimeList, notInCache, ++cacheIndex, currentTStart); + } +} diff --git a/core/src/Variable/VariableController.cpp b/core/src/Variable/VariableController.cpp index ccd7a5c..54124b6 100644 --- a/core/src/Variable/VariableController.cpp +++ b/core/src/Variable/VariableController.cpp @@ -1,3 +1,5 @@ +#include +#include #include #include @@ -7,9 +9,12 @@ #include